MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF MA0514.1 Sox3 letter-probability matrix: alength= 4 w= 10 nsites= 2067 E= 0 0.000000 0.719400 0.159652 0.120948 0.000000 0.750847 0.000000 0.249153 0.126754 0.000000 0.000000 0.873246 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.069666 0.930334 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.337687 0.122883 0.539429 0.009192 0.412675 0.010643 0.567489 0.020319 0.316401 0.184809 0.478471 URL http://jaspar.genereg.net/matrix/MA0514.1 MOTIF MA0514.2 Sox3 letter-probability matrix: alength= 4 w= 11 nsites= 11978 E= 0 0.312657 0.153114 0.290366 0.243864 0.341626 0.231842 0.246285 0.180247 0.981883 0.004341 0.006345 0.007430 0.012523 0.928786 0.014861 0.043830 0.942060 0.026048 0.007764 0.024128 0.970362 0.011939 0.011939 0.005761 0.047838 0.012523 0.008683 0.930957 0.134997 0.011104 0.838287 0.015612 0.146853 0.132075 0.639840 0.081232 0.287444 0.284438 0.243363 0.184755 0.288445 0.241025 0.242945 0.227584 URL http://jaspar.genereg.net/matrix/MA0514.2 MOTIF MA0514.3 Sox3 letter-probability matrix: alength= 4 w= 7 nsites= 11978 E= 0 0.981883 0.004341 0.006345 0.007430 0.012523 0.928786 0.014861 0.043830 0.942060 0.026048 0.007764 0.024128 0.970362 0.011939 0.011939 0.005761 0.047838 0.012523 0.008683 0.930957 0.134997 0.011104 0.838287 0.015612 0.146853 0.132075 0.639840 0.081232 URL http://jaspar.genereg.net/matrix/MA0514.3