MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF MA0909.1 HOXD13 letter-probability matrix: alength= 4 w= 10 nsites= 1087 E= 0 0.045998 0.632935 0.270469 0.050598 0.017045 0.572443 0.005682 0.404830 0.609389 0.307352 0.000000 0.083260 0.924731 0.000000 0.036290 0.038978 0.000000 0.001451 0.000000 0.998549 0.862155 0.000000 0.000000 0.137845 0.989928 0.004317 0.000000 0.005755 0.998549 0.001451 0.000000 0.000000 0.806565 0.087925 0.039859 0.065651 0.353198 0.300872 0.106105 0.239826 URL http://jaspar.genereg.net/matrix/MA0909.1 MOTIF MA0909.2 HOXD13 letter-probability matrix: alength= 4 w= 11 nsites= 368 E= 0 0.122283 0.494565 0.350543 0.032609 0.085302 0.482940 0.431759 0.000000 0.000000 1.000000 0.000000 0.000000 0.724409 0.275591 0.000000 0.000000 0.986595 0.000000 0.013405 0.000000 0.016043 0.000000 0.000000 0.983957 1.000000 0.000000 0.000000 0.000000 0.968421 0.000000 0.031579 0.000000 0.834467 0.165533 0.000000 0.000000 0.584127 0.395238 0.020635 0.000000 0.163043 0.823370 0.008152 0.005435 URL http://jaspar.genereg.net/matrix/MA0909.2 MOTIF MA0909.3 Hoxd13 letter-probability matrix: alength= 4 w= 10 nsites= 5977 E= 0 0.293793 0.221349 0.243768 0.241091 0.229547 0.297474 0.287101 0.185879 0.002677 0.981429 0.005688 0.010206 0.966204 0.000837 0.024762 0.008198 0.990965 0.002175 0.001840 0.005019 0.000000 0.000335 0.000502 0.999163 0.996319 0.000669 0.001171 0.001840 0.990965 0.006190 0.000335 0.002510 0.707211 0.117785 0.063410 0.111594 0.414422 0.184875 0.185210 0.215493 URL http://jaspar.genereg.net/matrix/MA0909.3 MOTIF MA0909.4 Hoxd13 letter-probability matrix: alength= 4 w= 7 nsites= 5977 E= 0 0.002677 0.981429 0.005688 0.010206 0.966204 0.000837 0.024762 0.008198 0.990965 0.002175 0.001840 0.005019 0.000000 0.000335 0.000502 0.999163 0.996319 0.000669 0.001171 0.001840 0.990965 0.006190 0.000335 0.002510 0.707211 0.117785 0.063410 0.111594 URL http://jaspar.genereg.net/matrix/MA0909.4