Detailed information of matrix profile MA0002.1

Profile summary

Name: RUNX1
Matrix ID: MA0002.1
Class: Runt domain factors
Family: Runt-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SELEX
Validation: 8413232
Uniprot ID: Q01196  
Pazar TF: TF0000001
TFBSshape ID:
TFencyclopedia IDs: 599
Source:
Comment: Matrix changed since last release: removal of primers and sites overlapping primers

Sequence logo

Frequency matrix

A [ 10 12 4 1 2 2 0 0 0 8 13 ]
C [ 2 2 7 1 0 8 0 0 1 2 2 ]
G [ 3 1 1 0 23 0 26 26 0 0 4 ]
T [ 11 11 14 24 1 16 0 0 25 16 7 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.