Detailed information of matrix profile MA0005.2

Profile summary

Name: AG
Matrix ID: MA0005.2
Class: MADS box factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 7901838
Uniprot ID: P17839  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment:

Sequence logo

Frequency matrix

A [ 25 11 12 22 10 2 19 23 40 13 17 26 1 0 21 55 51 19 ]
C [ 16 9 5 5 54 57 20 11 1 1 0 6 0 0 8 1 3 6 ]
G [ 10 6 4 17 0 0 8 15 0 0 2 3 65 66 8 0 3 20 ]
T [ 15 40 45 22 2 7 19 17 25 52 47 31 0 0 29 10 9 21 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links