Detailed information of matrix profile MA0008.1

Profile summary

Name: HAT5
Matrix ID: MA0008.1
Class: Homeo domain factors
Family: Homeo
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 8253077
Uniprot ID: Q02283  
Pazar TF:
TFBSshape ID: 15
TFencyclopedia IDs:
Source:
Comment: homodimer

Sequence logo

Frequency matrix

A [ 3 21 25 0 0 24 1 0 ]
C [ 13 1 0 0 5 0 0 0 ]
G [ 4 0 0 0 0 1 0 2 ]
T [ 5 3 0 25 20 0 24 23 ]

Binding sites information

TFBS profiles

External links