Detailed information of matrix profile MA0008.2

Profile summary

Name: HAT5
Matrix ID: MA0008.2
Class: Homeo domain factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 8253077
Uniprot ID: Q02283  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment:

Sequence logo

Frequency matrix

A [ 1 4 3 22 25 0 0 25 0 0 3 2 ]
C [ 5 5 13 1 0 0 5 0 0 0 1 8 ]
G [ 3 3 4 0 0 0 0 0 0 0 12 4 ]
T [ 10 10 3 1 0 25 20 0 25 25 0 1 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links