Detailed information of matrix profile MA0011.1

Profile summary

Name: br(var.2)
Matrix ID: MA0011.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: COMPILED
Validation: 8062827
Uniprot ID: Q01295  
Pazar TF: TF0000008
TFBSshape ID: 18
TFencyclopedia IDs:
Source:
Comment: Different splice forms affect DNA binding: four matrices

Sequence logo

Frequency matrix

A [ 3 5 0 0 12 1 2 1 ]
C [ 1 2 10 1 0 1 0 2 ]
G [ 1 1 0 0 0 2 1 1 ]
T [ 7 4 2 11 0 8 9 8 ]

Binding sites information

TFBS profiles