Detailed information of matrix profile MA0012.1

Profile summary

Name: br(var.3)
Matrix ID: MA0012.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: COMPILED
Validation: 8062827
Uniprot ID: Q01295  
Pazar TF: TF0000009
TFBSshape ID: 19
TFencyclopedia IDs:
Source:
Comment: Different splice forms affect DNA binding: four matrices

Sequence logo

Frequency matrix

A [ 3 9 10 12 0 4 10 6 6 4 2 ]
C [ 1 2 0 0 10 0 0 0 1 3 3 ]
G [ 1 1 0 0 1 0 0 4 2 2 5 ]
T [ 7 0 2 0 1 8 2 2 3 3 2 ]

Binding sites information

TFBS profiles