Detailed information of matrix profile MA0014.3

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Profile summary
Name: PAX5
Matrix ID: MA0014.3
Class: Paired box factors
Family: Paired domain only
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 8406007
Uniprot ID: Q02548  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 387 318 144 18 60 4 1200 23 84 12 285 115 ]
C [ 359 312 118 57 70 1355 30 1243 34 1231 354 578 ]
G [ 403 405 1081 1305 39 37 88 35 1276 151 148 179 ]
T [ 263 377 69 32 1243 16 94 111 18 18 625 540 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0014.1 MA0014 1 Pax5 Mus musculus
Paired domain only Paired box factors
MA0014.2 MA0014 2 PAX5 Homo sapiens
Paired domain only Paired box factors
MA0014.3 MA0014 3 PAX5 Homo sapiens
Paired domain only Paired box factors
MA0014.4 MA0014 4 PAX5 Homo sapiens
Paired domain only Paired box factors
     

-log(P-value) = 58.866

TFFM details

TFFM ID: TFFM0084.2

ChIP-seq Centrality
-log(P-value): 4255.38

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0084.2

ChIP-seq Centrality
-log(P-value): 4987.03

TFFM detailed summary logos

Description:

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GC Content: