Detailed information of matrix profile MA0045.1

Profile summary

Name: HMG-I/Y
Matrix ID: MA0045.1
Class: High-mobility group (HMG) domain factors
Family:
Collection: CORE
Taxon: Plants
Species: Pisum sativum
Data Type: SELEX
Validation: 9161031
Uniprot ID: Q43877  
Pazar TF:
TFBSshape ID: 48
TFencyclopedia IDs:
Source:
Comment: -

Sequence logo

Frequency matrix

A [ 3 7 9 3 11 11 11 3 4 3 8 8 9 9 11 2 ]
C [ 5 0 1 6 0 0 0 3 1 4 5 1 0 5 0 7 ]
G [ 4 3 1 4 3 2 2 2 8 6 1 4 2 0 3 0 ]
T [ 2 4 3 1 0 1 1 6 1 1 0 1 3 0 0 5 ]

Binding sites information

TFBS profiles

External links