Detailed information of matrix profile MA0046.1

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Profile summary
Name: HNF1A
Matrix ID: MA0046.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Vertebrata
Data Type: COMPILED
Validation: 9047360
Uniprot ID: P20823  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 3 2 4 17 19 6 7 20 2 1 20 20 0 2 ]
C [ 0 3 3 0 0 1 4 0 1 0 0 0 20 14 ]
G [ 13 8 1 4 0 0 2 0 2 0 0 0 0 0 ]
T [ 5 8 13 0 2 14 8 1 16 20 1 1 1 5 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0046.1 MA0046 1 HNF1A Vertebrata
POU domain factors Homeo domain factors
MA0046.2 MA0046 2 HNF1A Homo sapiens
POU domain factors Homeo domain factors
MA0046.3 MA0046 3 HNF1A Homo sapiens
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: HNF1 homeobox A

Alias: HNF1,LFB1

Symbol: HNF1A

Consensus:

Included Models:

GC Content: