Detailed information of matrix profile MA0046.2

Profile summary

Name: HNF1A
Matrix ID: MA0046.2
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 9047360
Uniprot ID: P20823  
Pazar TF: TF0000925
TFBSshape ID:
TFencyclopedia IDs: 863
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 5209 6981 376 2914 14149 14149 1274 3340 14149 711 42 14149 14149 1488 3972 ]
C [ 2441 415 1060 2170 3 633 423 3750 9 13 228 237 695 14149 3427 ]
G [ 3490 7168 903 544 246 8 7 4540 339 845 4 1337 1095 655 2275 ]
T [ 3009 636 14149 14149 14 364 14149 2518 651 14149 14149 1638 174 914 4475 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.