Detailed information of matrix profile MA0063.2

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Profile summary
Name: NKX2-5
Matrix ID: MA0063.2
Class: Homeo domain factors
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 27013732
Uniprot ID: P52952  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1282 1075 250 288 841 5166 153 74 322 954 1010 ]
C [ 1084 1478 98 217 62 61 49 76 24 1318 1687 ]
G [ 1251 1406 165 120 4319 82 5098 48 5002 1646 1024 ]
T [ 1827 1485 4931 4819 222 135 144 5246 96 1526 1723 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0063.1 MA0063 1 Nkx2-5 Mus musculus
NK Homeo domain factors
MA0063.2 MA0063 2 NKX2-5 Homo sapiens
NK Homeo domain factors
MA0063.3 MA0063 3 NKX2-5 Homo sapiens
NK Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0076.2

ChIP-seq Centrality
-log(P-value): 3363.69

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0076.2

ChIP-seq Centrality
-log(P-value): 3303.98

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: