Detailed information of matrix profile MA0065.1

Profile summary

Name: PPARG::RXRA
Matrix ID: MA0065.1
Class: Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)::RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SELEX
Validation: 11139380
Uniprot ID: P19793   P37231  
Pazar TF: TF0000041
TFBSshape ID:
TFencyclopedia IDs: 336 343
Source:
Comment: Heterodimer between PPARG and RXRA

Sequence logo

Frequency matrix

A [ 10 7 19 13 17 0 0 0 2 41 41 39 0 0 0 2 38 10 13 7 ]
C [ 12 13 4 1 0 0 0 2 37 0 0 0 0 0 2 36 1 12 15 10 ]
G [ 7 8 6 27 24 41 39 0 2 0 0 2 41 39 0 1 2 4 9 12 ]
T [ 12 13 12 0 0 0 2 39 0 0 0 0 0 2 39 2 0 15 4 12 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.