Detailed information of matrix profile MA0074.1

Profile summary

Name: RXRA::VDR
Matrix ID: MA0074.1
Class: Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)::Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SELEX
Validation: 8674817
Uniprot ID: P19793   P11473  
Pazar TF: TF0000050
TFBSshape ID: 74
TFencyclopedia IDs: 343 348
Source:
Comment: heterodimer between RXRA and VDR

Sequence logo

Frequency matrix

A [ 3 0 0 0 0 9 4 2 2 5 0 0 1 0 7 ]
C [ 0 0 0 0 9 0 2 4 0 0 0 0 0 9 1 ]
G [ 7 10 9 0 0 1 0 2 8 5 10 0 0 0 2 ]
T [ 0 0 1 10 1 0 4 2 0 0 0 10 9 1 0 ]

Binding sites information

TFBS profiles