Detailed information of matrix profile MA0083.3

Profile summary

Name: SRF
Matrix ID: MA0083.3
Class: MADS box factors
Family: Responders to external signals (SRF/RLM1)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 2243767
Uniprot ID: P11831  
Pazar TF: TF0000058
TFBSshape ID:
TFencyclopedia IDs: 153
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 214 75 627 0 3 1137 54 1163 1 1162 439 8 8 262 337 913 ]
C [ 125 152 611 1771 1787 13 0 0 5 0 12 9 2 105 1023 63 ]
G [ 80 1144 144 15 11 18 6 2 8 0 0 1896 1872 670 145 98 ]
T [ 1129 372 167 0 19 61 1571 0 1610 16 1074 0 7 686 72 248 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.