Detailed information of matrix profile MA0087.1

Profile summary

Name: Sox5
Matrix ID: MA0087.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: SELEX
Validation: 1396566
Uniprot ID: P35710  
Pazar TF: TF0000062
TFBSshape ID: 87
TFencyclopedia IDs: 838
Source:
Comment: -

Sequence logo

Frequency matrix

A [ 23 0 0 1 0 1 8 ]
C [ 0 0 0 0 1 1 3 ]
G [ 0 1 0 22 0 0 4 ]
T [ 0 22 23 0 22 21 8 ]

Binding sites information

TFBS profiles