Detailed information of matrix profile MA0105.4

Profile summary

Name: NFKB1
Matrix ID: MA0105.4
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 20066093
Uniprot ID: P19838  
Pazar TF: TF0000076
TFBSshape ID:
TFencyclopedia IDs: 769
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 8441 9 0 4 229 12004 7003 22 17 497 4 6 1231 ]
C [ 2013 0 3 0 3 62 18 1311 9574 9536 9591 9642 1293 ]
G [ 990 19047 19177 19167 19458 821 32 116 4 1 1 2 3348 ]
T [ 818 5 2 318 27 27 6744 14372 130 3 2 8 9386 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.