Detailed information of matrix profile MA0124.2

Profile summary

Name: Nkx3-1
Matrix ID: MA0124.2
Class: Homeo domain factors
Family: NK-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: P97436  
Pazar TF: TF0000819
TFBSshape ID:
TFencyclopedia IDs: 779
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 2438 981 0 5335 59 0 0 5335 5335 ]
C [ 991 5335 5335 28 5335 1 254 273 1407 ]
G [ 1361 1776 10 10 9 0 0 173 2132 ]
T [ 544 275 336 88 9 5335 5335 523 1509 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.