Detailed information of matrix profile MA0132.2

Profile summary

Name: PDX1
Matrix ID: MA0132.2
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: P52945  
Pazar TF: TF0000374
TFBSshape ID:
TFencyclopedia IDs: 797
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 1483 292 4839 7130 0 0 7130 2181 ]
C [ 2206 2469 2291 45 0 0 0 1216 ]
G [ 2441 0 185 0 0 0 0 2881 ]
T [ 999 4661 78 0 7130 7130 0 852 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.