Detailed information of matrix profile MA0139.1

Profile summary

Name: CTCF
Matrix ID: MA0139.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 17512414
Uniprot ID: P49711  
Source:
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

A [ 59 396 37 17 67 71 8 341 9 3 18 324 11 91 2 36 134 187 459 ]
C [ 266 73 307 507 5 775 890 504 566 903 32 48 334 65 0 21 449 414 76 ]
G [ 181 322 482 13 733 8 0 12 3 0 11 433 528 13 903 800 49 145 291 ]
T [ 402 117 82 372 104 56 12 54 333 5 851 107 40 744 8 56 281 167 87 ]

Binding sites information

External links