Detailed information of matrix profile MA0142.1

Profile summary

Name: Pou5f1::Sox2
Matrix ID: MA0142.1
Class: Homeo domain factors::High-mobility group (HMG) domain factors
Family: POU domain factors::SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 18555785
Uniprot ID: P20263   P48432  
Pazar TF:
TFBSshape ID: 135
TFencyclopedia IDs: 810
Source:
Comment: -

Sequence logo

Frequency matrix

A [ 63 579 11 47 118 415 206 1235 17 10 14 1050 887 1200 198 ]
C [ 846 58 50 12 363 18 365 30 5 16 1029 16 68 33 119 ]
G [ 66 28 36 79 825 29 186 24 15 1239 129 30 315 75 207 ]
T [ 389 701 1270 1231 63 907 612 80 1332 104 196 269 92 53 837 ]

Binding sites information

TFBS profiles