Detailed information of matrix profile MA0143.3

Profile summary

Name: Sox2
Matrix ID: MA0143.3
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 15863505
Uniprot ID: P48432  
Pazar TF: TF0000779
TFBSshape ID:
TFencyclopedia IDs: 531
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

A [ 0 0 669 0 0 0 0 0 ]
C [ 1476 1476 0 0 0 0 0 419 ]
G [ 0 0 0 0 0 1476 0 297 ]
T [ 0 0 807 1476 1476 0 1476 760 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.