Detailed information of matrix profile MA0148.2

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Profile summary
Name: FOXA1
Matrix ID: MA0148.2
Class: Fork head/winged helix factors
Family: FOX
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 18798982
Uniprot ID: P55317  
Source: ChIP-seq
Comment:

Sequence logo

Frequency matrix

         
A [ 211 482 414 496 79 38 811 862 885 7 876 ]
C [ 467 24 69 5 5 368 77 24 4 772 2 ]
G [ 125 7 369 106 808 12 3 7 7 7 1 ]
T [ 89 379 42 289 4 478 6 4 1 108 13 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0148.1 MA0148 1 FOXA1 Homo sapiens
FOX Fork head/winged helix factors
MA0148.2 MA0148 2 FOXA1 Homo sapiens
FOX Fork head/winged helix factors
MA0148.3 MA0148 3 FOXA1 Homo sapiens
FOX Fork head/winged helix factors
MA0148.4 MA0148 4 FOXA1 Homo sapiens
FOX Fork head/winged helix factors
MA0148.5 MA0148 5 FOXA1 Homo sapiens
FOX Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: