Detailed information of matrix profile MA0148.3

Profile summary

Name: FOXA1
Matrix ID: MA0148.3
Class: Fork head / winged helix factors
Family: Forkhead box (FOX) factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 18798982
Uniprot ID: P55317  
Pazar TF: TF0000263
TFBSshape ID:
TFencyclopedia IDs: 175
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

A [ 4328 4659 3062 7135 70 5883 0 0 0 18252 0 9193 827 10702 4807 ]
C [ 4827 6851 8558 4317 0 0 0 0 0 0 20556 2655 7296 1 2603 ]
G [ 4124 4731 5314 3641 12 16125 0 1292 2859 3756 0 0 1392 63 9415 ]
T [ 8729 5767 5074 6915 21926 0 22008 20716 19149 0 1452 10160 12493 11242 5183 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.