Detailed information of matrix profile MA0158.1

Profile summary

Name: HOXA5
Matrix ID: MA0158.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus Homo sapiens
Data Type: COMPILED
Validation: 17916232
Uniprot ID: P20719  
Pazar TF: TF0000501
TFBSshape ID: 147
TFencyclopedia IDs: 682
Source:
Comment: Annotations from PAZAR HOXA5_MOUSE + HOXA5_HUMAN (TF0000293, TF0000501) in the pleiades genes project.

Sequence logo

Frequency matrix

A [ 2 7 0 6 14 14 0 0 ]
C [ 13 0 7 0 0 0 0 1 ]
G [ 0 5 5 1 0 2 0 6 ]
T [ 0 4 4 9 2 0 16 9 ]

Binding sites information

TFBS profiles