Detailed information of matrix profile MA0160.1

Profile summary

Name: NR4A2
Matrix ID: MA0160.1
Class: Nuclear receptors with C4 zinc fingers
Family: NGFI-B-related receptors (NR4)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus Rattus norvegicus Homo sapiens
Data Type: COMPILED
Validation: 17916232
Uniprot ID: P43354  
Pazar TF: TF0000135
TFBSshape ID: 149
TFencyclopedia IDs: 378 328
Source:
Comment: Annotations from PAZAR NR4A2_MOUSE + NR4A2_RAT + NR4A2_HUMAN (TF0000135, TF0000153, TF0000157) in the pleiades genes project.

Sequence logo

Frequency matrix

A [ 8 13 0 3 2 0 14 3 ]
C [ 1 0 0 0 2 13 0 8 ]
G [ 3 1 13 11 0 0 0 2 ]
T [ 1 0 1 0 10 1 0 0 ]

Binding sites information

TFBS profiles