Detailed information of matrix profile MA0263.1

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Profile summary
Name: ceh-10::ttx-3
Matrix ID: MA0263.1
Class: Homeo domain factors::Homeo domain factors
Family: Paired-related HD factors::HD-LIM factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: EMSA
Validation: 15177025
Uniprot ID: G5EE86   P41935  
Source:
Comment: dimer

Sequence logo

Frequency matrix

         
A [ 5 4 27 29 0 0 23 20 10 1 0 28 28 0 ]
C [ 9 0 0 0 22 0 0 1 1 28 20 0 1 1 ]
G [ 0 1 2 0 3 15 5 5 16 0 0 0 0 0 ]
T [ 15 24 0 0 4 14 1 3 2 0 9 1 0 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0263.1 MA0263 1 ceh-10::ttx-3 Caenorhabditis elegans
Paired-related HD factors::HD-LIM factors Homeo domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: