Detailed information of matrix profile MA0359.1

  1. Home
  2. Matrix > MA0359.1

Profile summary
Name: RAP1
Matrix ID: MA0359.1
Class: Tryptophan cluster factors
Family: Myb/SANT domain factors
Collection: CORE
Taxon: Fungi
Species: Saccharomyces cerevisiae
Data Type: PBM, CSA and/or DIP-chip
Validation: 19111667
Uniprot ID: P11938  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 1 1 14 65 2 9 1 23 1 1 ]
C [ 0 0 14 8 27 0 1 0 0 12 ]
G [ 13 98 0 11 0 90 97 75 0 69 ]
T [ 86 1 72 17 71 1 1 1 98 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0359.1 MA0359 1 RAP1 Saccharomyces cerevisiae
Myb/SANT domain factors Tryptophan cluster factors
MA0359.2 MA0359 2 RAP1 Saccharomyces cerevisiae
Myb/SANT domain factors Tryptophan cluster factors
MA0359.3 MA0359 3 RAP1 Saccharomyces cerevisiae
Myb/SANT domain factors Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0568.1

ChIP-seq Centrality
-log(P-value): 418.367

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0568.1

ChIP-seq Centrality
-log(P-value): 466.06

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: