Detailed information of matrix profile MA0442.1

Profile summary

Name: SOX10
Matrix ID: MA0442.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus Rattus norvegicus Homo sapiens
Data Type: COMPILED
Validation: 17916232
Uniprot ID: P56693  
Pazar TF: TF0000224
TFBSshape ID:
TFencyclopedia IDs: 496 497
Source:
Comment: Annotations from PAZAR SOX10_RAT + SOX10_HUMAN + SOX10_MOUSE (TF0000223, TF0000224, TF0000226) in the pleiades genes project.

Sequence logo

Frequency matrix

A [ 0 8 0 0 0 0 ]
C [ 19 2 1 0 3 0 ]
G [ 0 2 4 0 19 1 ]
T [ 3 10 17 22 0 21 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.