Detailed information of matrix profile MA0494.1

Profile summary

Name: Nr1h3::Rxra
Matrix ID: MA0494.1
Class: Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)::RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 21349840
Uniprot ID: Q9Z0Y9   P28700  
Pazar TF:
TFBSshape ID: 295
TFencyclopedia IDs: 365 315
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

A [ 0 140 738 246 58 78 358 374 794 278 77 559 900 255 117 11 135 281 237 ]
C [ 50 30 243 971 1080 313 318 257 0 19 0 77 177 962 1040 502 508 196 290 ]
G [ 28 1089 137 0 3 128 343 336 321 903 4 440 192 20 0 42 196 333 439 ]
T [ 1191 10 151 52 128 750 250 302 154 69 1188 193 0 32 112 714 430 459 303 ]

Binding sites information

TFBS profiles