Detailed information of matrix profile MA0499.1

Profile summary

Name: Myod1
Matrix ID: MA0499.1
Class: Basic helix-loop-helix factors (bHLH)
Family: MyoD / ASC-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 20412780
Uniprot ID: P10085  
Pazar TF: TF0000591
TFBSshape ID: 300
TFencyclopedia IDs: 755
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

A [ 6862 4142 0 24353 0 0 0 0 9 16 5861 1913 4129 ]
C [ 5589 6513 24514 0 6423 24514 0 0 9087 11010 7591 11622 7657 ]
G [ 5003 11000 0 0 18072 0 0 24514 654 2905 5945 4319 4423 ]
T [ 7060 2859 0 161 19 0 24514 0 14764 10583 5117 6660 8305 ]

Binding sites information

TFBS profiles