Detailed information of matrix profile MA0503.1

Profile summary

Name: Nkx2-5(var.2)
Matrix ID: MA0503.1
Class: Homeo domain factors
Family: NK-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 7797561
Uniprot ID: P42582  
Pazar TF: TF0000040
TFBSshape ID:
TFencyclopedia IDs: 776
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

A [ 1790 1282 344 0 2467 0 0 0 2858 2265 502 ]
C [ 327 192 1777 3429 6 3429 0 3391 431 3 956 ]
G [ 821 1467 1292 0 0 0 0 0 0 825 1795 ]
T [ 491 488 16 0 956 0 3429 38 140 336 176 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.