Detailed information of matrix profile MA0508.1

Profile summary

Name: PRDM1
Matrix ID: MA0508.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 20421211
Uniprot ID: O75626  
Pazar TF: TF0001103
TFBSshape ID: 308
TFencyclopedia IDs:
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

A [ 1779 1649 3148 3486 4173 422 728 211 4603 4161 4497 159 117 1057 2042 ]
C [ 471 298 345 439 0 0 110 0 0 0 0 142 458 498 778 ]
G [ 1037 2331 688 442 430 4038 930 4392 0 430 39 4186 520 2239 973 ]
T [ 1316 325 422 236 0 143 2835 0 0 12 67 116 3508 809 810 ]

Binding sites information

TFBS profiles