Detailed information of matrix profile MA0509.1

Profile summary

Name: Rfx1
Matrix ID: MA0509.1
Class: Fork head / winged helix factors
Family: RFX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 20189986
Uniprot ID: P48377  
Pazar TF:
TFBSshape ID: 309
TFencyclopedia IDs: 819
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

A [ 290 58 145 421 37 0 1254 138 604 186 287 1793 2082 0 ]
C [ 157 222 833 433 1748 2048 402 115 0 0 1710 0 0 2138 ]
G [ 1532 377 131 762 96 0 73 96 1534 1952 12 244 56 0 ]
T [ 159 1481 1029 522 257 90 409 1789 0 0 129 101 0 0 ]

Binding sites information

TFBS profiles