Detailed information of matrix profile MA0512.1

Profile summary

Name: Rxra
Matrix ID: MA0512.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 10669605
Uniprot ID: P28700  
Pazar TF: TF0000487
TFBSshape ID: 312
TFencyclopedia IDs: 393
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

A [ 278 4154 2623 4877 0 0 0 0 5348 1150 1640 ]
C [ 4521 418 252 0 0 0 583 5348 0 1070 742 ]
G [ 305 9 2473 471 5348 3882 643 0 0 2336 1569 ]
T [ 244 767 0 0 0 1466 4122 0 0 792 1397 ]

Binding sites information

TFBS profiles