Detailed information of matrix profile MA0515.1

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Profile summary
Name: Sox6
Matrix ID: MA0515.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 21985497
Uniprot ID: P40645  
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 4 0 161 0 0 0 0 0 4 14 ]
C [ 139 221 0 0 0 0 0 115 112 76 ]
G [ 50 0 0 0 0 249 0 5 0 31 ]
T [ 56 28 88 249 249 0 249 129 133 128 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0515.1 MA0515 1 Sox6 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
     

-log(P-value) = 110.0

TFFM details

TFFM ID: TFFM0588.1

ChIP-seq Centrality
-log(P-value): 440.441

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0588.1

ChIP-seq Centrality
-log(P-value): 551.747

TFFM detailed summary logos

Description: SRY (sex determining region Y)-box 6

Alias: -

Symbol: SOX6

Consensus:

Included Models:

GC Content: