Detailed information of matrix profile MA0515.1

Profile summary

Name: Sox6
Matrix ID: MA0515.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 21985497
Uniprot ID: P40645  
Pazar TF:
TFBSshape ID: 315
TFencyclopedia IDs: 839
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

A [ 4 0 161 0 0 0 0 0 4 14 ]
C [ 139 221 0 0 0 0 0 115 112 76 ]
G [ 50 0 0 0 0 249 0 5 0 31 ]
T [ 56 28 88 249 249 0 249 129 133 128 ]

Binding sites information

TFBS profiles