Detailed information of matrix profile MA0521.1

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Profile summary
Name: Tcf12
Matrix ID: MA0521.1
Class: Basic helix-loop-helix factors (bHLH)
Family: E2A
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 1501295
Uniprot ID: Q61286  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 2191 3642 1682 0 12895 0 0 0 0 0 17 ]
C [ 4836 2925 3811 12895 0 1889 12887 0 0 3951 5123 ]
G [ 3005 2416 5527 0 0 10822 0 0 12895 124 1585 ]
T [ 2863 3912 1875 0 0 184 8 12895 0 8820 6170 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0521.1 MA0521 1 Tcf12 Mus musculus
E2A Basic helix-loop-helix factors (bHLH)
MA0521.2 MA0521 2 Tcf12 Mus musculus
E2A Basic helix-loop-helix factors (bHLH)
MA0521.3 MA0521 3 Tcf12 Mus musculus
E2A Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0107.1

ChIP-seq Centrality
-log(P-value): 9554.51

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0107.1

ChIP-seq Centrality
-log(P-value): 9613.24

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: