Detailed information of matrix profile MA0534.1

Profile summary

Name: EcR::usp
Matrix ID: MA0534.1
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)::RXR-related receptors (NR2)
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-seq
Validation: 8649409
Uniprot ID: P20153   P34021  
Source:
Comment: Class and TF information is inferred from the human ortholog to EcR and usp, respectively, obtained from Flybase.

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Frequency matrix

A [ 52 70 26 0 5 0 104 54 0 26 95 61 0 0 0 ]
C [ 0 0 0 0 0 104 0 5 30 0 0 35 75 32 39 ]
G [ 28 34 57 55 33 0 0 11 0 66 0 3 10 12 36 ]
T [ 24 0 21 49 66 0 0 34 74 12 9 5 19 60 29 ]

Binding sites information

External links