Detailed information of matrix profile MA0537.1

Profile summary

Name: blmp-1
Matrix ID: MA0537.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 20421211
Uniprot ID: Q93560  
Pazar TF:
TFBSshape ID: 337
TFencyclopedia IDs:
Source:
Comment: C. elegans blmp-1 is the homologue of mammalian Blimp1 (B Lymphocyte-Induced Maturation Protein-1, official name: PRDM1).

Sequence logo

Frequency matrix

A [ 1909 3092 2926 3216 842 1157 0 3368 2129 3081 1745 ]
C [ 0 0 0 0 0 335 0 0 0 0 128 ]
G [ 1459 266 442 152 2060 548 3368 0 1086 254 1383 ]
T [ 0 10 0 0 466 1328 0 0 153 33 112 ]

Binding sites information

TFBS profiles

External links