Detailed information of matrix profile MA0541.1

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Profile summary
Name: efl-1
Matrix ID: MA0541.1
Class: Fork head/winged helix factors
Family: E2F
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 11463372
Uniprot ID: G5EF11  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 1146 1125 468 13 37 0 0 0 0 0 71 665 661 415 612 ]
C [ 352 171 177 156 18 1445 967 2206 3 2123 893 875 166 811 194 ]
G [ 389 214 137 26 55 628 1239 0 2192 22 1150 314 799 391 738 ]
T [ 319 696 1424 2011 2096 133 0 0 11 61 92 352 580 589 662 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0541.1 MA0541 1 efl-1 Caenorhabditis elegans
E2F Fork head/winged helix factors
MA0541.2 MA0541 2 efl-1 Caenorhabditis elegans
E2F Fork head/winged helix factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0470.1

ChIP-seq Centrality
-log(P-value): 1257.41

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0470.1

ChIP-seq Centrality
-log(P-value): 640.076

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: