Detailed information of matrix profile MA0551.1

Profile summary

Name: HY5
Matrix ID: MA0551.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-chip
Validation: 18287490
Uniprot ID: O24646  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment:

Sequence logo

Frequency matrix

A [ 103 108 52 9 150 0 310 3 1 0 2 4 24 183 94 89 ]
C [ 60 56 55 8 165 317 1 311 5 9 1 1 279 30 62 68 ]
G [ 68 62 30 279 1 1 9 5 311 1 317 165 8 55 56 60 ]
T [ 89 94 183 24 4 2 0 1 3 310 0 150 9 52 108 103 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links