Detailed information of matrix profile MA0552.1

Profile summary

Name: PIF1
Matrix ID: MA0552.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-chip
Validation: 15448264
Uniprot ID: Q8GZM7  
Pazar TF:
TFBSshape ID: 351
TFencyclopedia IDs:
Source:
Comment:

Sequence logo

Frequency matrix

A [ 37 25 35 53 27 9 38 0 114 0 0 0 0 22 ]
C [ 12 0 28 8 27 17 14 103 0 113 0 2 0 23 ]
G [ 37 53 29 40 32 73 14 11 0 1 114 0 114 51 ]
T [ 28 36 22 13 28 15 48 0 0 0 0 112 0 18 ]

Binding sites information

TFBS profiles

External links