Detailed information of matrix profile MA0552.1

Profile summary

Name: PIF1
Matrix ID: MA0552.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-chip
Validation: 15448264
Uniprot ID: Q8GZM7  
Pazar TF:
TFBSshape ID: 351
TFencyclopedia IDs:
Source:
Comment:

Sequence logo

Frequency matrix

A [ 18 0 112 0 0 0 0 48 15 28 13 22 36 28 ]
C [ 51 114 0 114 1 0 11 14 73 32 40 29 53 37 ]
G [ 23 0 2 0 113 0 103 14 17 27 8 28 0 12 ]
T [ 22 0 0 0 0 114 0 38 9 27 53 35 25 37 ]

Binding sites information

TFBS profiles

External links