Detailed information of matrix profile MA0554.1

Profile summary

Name: SOC1
Matrix ID: MA0554.1
Class: MADS box factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-chip
Validation: 8774892
Uniprot ID: O64645  
Pazar TF:
TFBSshape ID: 353
TFencyclopedia IDs:
Source:
Comment:

Sequence logo

Frequency matrix

A [ 288 172 65 62 117 20 0 459 137 130 22 98 90 181 17 ]
C [ 123 264 27 0 47 855 617 37 78 6 8 24 71 10 23 ]
G [ 99 113 34 51 89 13 9 56 0 0 0 0 86 683 665 ]
T [ 378 339 762 775 635 0 262 336 673 752 858 766 641 14 183 ]

Binding sites information

TFBS profiles

External links