Detailed information of matrix profile MA0554.1

Profile summary

Name: SOC1
Matrix ID: MA0554.1
Class: MADS box factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-chip
Validation: 8774892
Uniprot ID: O64645  
Pazar TF:
TFBSshape ID: 353
TFencyclopedia IDs:
Source:
Comment:

Sequence logo

Frequency matrix

A [ 183 14 641 766 858 752 673 336 262 0 635 775 762 339 378 ]
C [ 665 683 86 0 0 0 0 56 9 13 89 51 34 113 99 ]
G [ 23 10 71 24 8 6 78 37 617 855 47 0 27 264 123 ]
T [ 17 181 90 98 22 130 137 459 0 20 117 62 65 172 288 ]

Binding sites information

TFBS profiles

External links