Detailed information of matrix profile MA0558.1

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Profile summary
Name: FLC
Matrix ID: MA0558.1
Class: MADS box factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 21464308
Uniprot ID: Q5Q9J1  
Pazar TF:
TFBSshape ID: 356
TFencyclopedia IDs:
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 121 90 95 82 78 54 9 135 198 261 233 193 78 141 0 217 268 257 62 109 103 ]
C [ 44 61 37 26 25 193 185 70 10 0 3 3 11 0 0 21 3 1 43 47 50 ]
G [ 45 63 21 36 66 12 4 37 38 3 3 18 15 134 275 6 4 15 148 17 29 ]
T [ 65 61 122 131 106 16 77 33 29 11 36 61 171 0 0 31 0 2 22 102 93 ]

Binding sites information

   

TFBS profiles

External links

         
Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0558.1 MA0558 1 FLC Arabidopsis thaliana
MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: