Detailed information of matrix profile MA0576.1

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Profile summary
Name: RAX3
Matrix ID: MA0576.1
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 9628022
Uniprot ID: Q9M2Y9  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 22 0 18 14 0 0 0 78 0 0 0 0 4 ]
C [ 18 14 4 9 0 0 0 4 0 0 0 0 32 ]
G [ 42 86 78 55 100 100 0 4 100 100 0 96 60 ]
T [ 18 0 0 22 0 0 100 14 0 0 100 4 4 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0576.1 MA0576 1 RAX3 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA0576.2 MA0576 2 RAX3 Arabidopsis thaliana
MYB Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: