Detailed information of matrix profile MA0588.1

Profile summary

Name: TGA1
Matrix ID: MA0588.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 1446171
Uniprot ID: Q39237  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment:

Sequence logo

Frequency matrix

A [ 2 3 11 0 0 36 0 2 1 6 11 ]
C [ 5 8 9 0 0 0 33 0 3 5 0 ]
G [ 6 16 12 0 36 0 0 34 2 6 6 ]
T [ 10 2 0 36 0 0 3 0 20 5 7 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.

External links